Master index | Index for Mateda2.0/functions/protein |
CallBackTracking | |
CheckConstraint | [Overlappings,Pos] = CheckConstraint(Pos,pos,vector) |
CreateFibbInitConf | Translates the vector to the positions in the grid |
EvalChain | [Collisions,Overlappings,Pos] = EvalChain(vector) |
EvalChainFunctional | Given a chain of molecules, calculates the numer of Collisions with |
EvaluateEnergy | EvaluateEnergy: Evaluates the energy corresponding to the sequence lattice configuration determined by the lattice in vector. |
EvaluateEnergyFunctional | [energy] = EvaluateEnergyFunctional(vector) |
EvaluateOffHPProtein | [Evals] = EvaluateOffHPProtein(Pop) |
HP_newrepairing | HP_newrepairing: An auxiliary function that modifies a sequence configuration to avoid self-intersections |
HP_repairing | [NewPop] = HP_repairing(Pop,Card,repairing_params) |
MakePajekGraphOfProtein | [Pos] = MakePajekGraphOfProtein(vector) |
NewFeasible | NewFeasible evaluates if a given move is feasible. |
OffFindPos | OffFindPos translates the vector of angles to the positions into the lattice. |
OffPrintProtein | [] = OffPrintProtein(vector) |
PrintProtein | [Pos] = PrintProtein(vector) |
PutMoveAtPos | PutMoveAtPos: updates the lattice given a mov |